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Balík: phybin (0.3-1)

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Ostatné balíky súvisiace s balíkom phybin

  • závisí
  • odporúča
  • navrhuje
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
  • dep: libffi6 (>= 3.0.4)
    Foreign Function Interface library runtime
  • dep: libgmp10
    Multiprecision arithmetic library

Stiahnuť phybin

Stiahnuť pre všetky dostupné architektúry
Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 1,608.1 kB12671 kB [zoznam súborov]
i386 1,626.1 kB9926 kB [zoznam súborov]