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Balík: seqtk (1.2-2)

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format

Currently, seqtk supports quality based trimming with the phred algorithm, converting fastq to fasta, reverse complementing sequences, extracting or masking subsequences in regions given in a BED/name list file, and more. It contains a subsampling module to sample exactly n sequences or a fraction of sequences.

Seqtk supports both fasta and fastq input files, which can be optionally gzip compressed.

Ostatné balíky súvisiace s balíkom seqtk

  • závisí
  • odporúča
  • navrhuje
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Stiahnuť seqtk

Stiahnuť pre všetky dostupné architektúry
Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 29.8 kB79 kB [zoznam súborov]
i386 32.4 kB87 kB [zoznam súborov]