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[ Zdroj: tophat ]
Balík: tophat (2.1.1+dfsg1-1)
Odkazy pre tophat
Zdroje Trisquel:
Stiahnuť zdrojový balík tophat:
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Carlos Borroto
- Alexandre Mestiashvili
- Andreas Tille
Externé zdroje:
- Domovská stránka [ccb.jhu.edu]
Podobné balíky:
fast splice junction mapper for RNA-Seq reads
TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons. TopHat is a collaborative effort between the University of Maryland Center for Bioinformatics and Computational Biology and the University of California, Berkeley Departments of Mathematics and Molecular and Cell Biology.
Ostatné balíky súvisiace s balíkom tophat
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- dep: libboost-system1.65.1
- Operating system (e.g. diagnostics support) library
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- dep: libboost-thread1.65.1
- portable C++ multi-threading
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- dep: libc6 (>= 2.15)
- GNU C Library: Shared libraries
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: samtools (>= 1.5)
- processing sequence alignments in SAM and BAM formats
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- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
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- sug: cufflinks
- Balík nie je dostupný
Stiahnuť tophat
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 659.8 kB | 3807 kB | [zoznam súborov] |