Skip to content
Sections
>> Trisquel >> Balíky >> etiona >> science >> zalign
etiona  ] [  nabia  ] [  aramo  ]
[ Zdroj: zalign  ]

Balík: zalign (0.9.1-3)

Odkazy pre zalign

zalign

Zdroje Trisquel:

Stiahnuť zdrojový balík zalign:

Správca:

Original Maintainers:

  • Debian Med Packaging Team (Konferencia)
  • Steffen Moeller
  • Andreas Tille

Externé zdroje:

Podobné balíky:

parallel local alignment of biological sequences

zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task.

zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered.

Ostatné balíky súvisiace s balíkom zalign

  • závisí
  • odporúča
  • navrhuje
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libopenmpi2
    high performance message passing library -- shared library
  • dep: libstdc++6 (>= 4.9)
    GNU Standard C++ Library v3

Stiahnuť zalign

Stiahnuť pre všetky dostupné architektúry
Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 48.1 kB263 kB [zoznam súborov]
i386 48.6 kB253 kB [zoznam súborov]