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Paket: macsyfinder (2.0~rc4-2)

detection of macromolecular systems in protein datasets

MacSyFinder is a program to model and detect macromolecular systems, genetic pathways... in protein datasets. In prokaryotes, these systems have often evolutionarily conserved properties: they are made of conserved components, and are encoded in compact loci (conserved genetic architecture). The user models these systems with MacSyFinder to reflect these conserved features, and to allow their efficient detection

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms.

Andra paket besläktade med macsyfinder

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  • dep: hmmer
    profile hidden Markov models for protein sequence analysis
  • dep: libjs-jquery
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  • dep: libjs-sphinxdoc (>= 4.3)
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  • dep: libjs-underscore
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  • dep: ncbi-blast+
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  • dep: python3
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  • dep: python3-colorlog
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  • dep: python3-networkx
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  • dep: python3-packaging
    core utilities for python3 packages
  • dep: python3-pandas
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  • dep: python3-yaml
    YAML parser and emitter for Python3
  • dep: sphinx-rtd-theme-common (>= 1.0.0+dfsg)
    sphinx theme from readthedocs.org (common files)

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amd64 11.510,8 kbyte34097 kbyte [filförteckning]