[ Källkod: bio-eagle ]
Paket: bio-eagle (2.4-1)
Länkar för bio-eagle
Trisquelresurser:
Hämta källkodspaketet bio-eagle:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Dylan Aïssi
Externa resurser:
- Hemsida [data.broadinstitute.org]
Liknande paket:
Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.
Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
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- dep: libgcc1 (>= 1:3.0) [amd64]
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- dep: libgomp1 (>= 4.9)
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- dep: libhts2 (>= 1.4.1)
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- dep: libopenblas-base
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- dep: libstdc++6 (>= 5.2)
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- rec: med-config (>= 2.1)
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- sug: bio-eagle-examples
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Hämta bio-eagle
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 218,2 kbyte | 641 kbyte | [filförteckning] |
| i386 | 246,0 kbyte | 688 kbyte | [filförteckning] |