Paket: concavity (0.1+dfsg.1-1)

Länkar för concavity

Trisquelresurser:

Hämta källkodspaketet concavity:

Ansvarig:

Debian Med Packaging Team (E-postarkiv)

Original Maintainers:

Debian Med Packaging Team (E-postarkiv)
Laszlo Kajan
Andreas Tille

Externa resurser:

Hemsida [compbio.cs.princeton.edu]

Liknande paket:

predictor of protein ligand binding sites from structure and conservation

ConCavity predicts protein ligand binding sites by combining evolutionary sequence conservation and 3D structure.

ConCavity takes as input a PDB format protein structure and optionally files that characterize the evolutionary sequence conservation of the chains in the structure file.

The following result files are produced by default:

 * Residue ligand binding predictions for each chain (*.scores).
 * Residue ligand binding predictions in a PDB format file (residue
   scores placed in the temp. factor field, *_residue.pdb).
 * Pocket prediction locations in a DX format file (*.dx).
 * PyMOL script to visualize the predictions (*.pml).

Andra paket besläktade med concavity

beror

rekommenderar

föreslår

dep: libc6 (>= 2.14) [amd64]

GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb

dep: libc6 (>= 2.4) [i386]
dep: libgcc1 (>= 1:3.0)

GCC support library
dep: libstdc++6 (>= 4.1.1)

GNU Standard C++ Library v3

sug: conservation-code

protein sequence conservation scoring tool
sug: pymol

Molecular Graphics System

Hämta concavity

Hämtningar för alla tillgängliga arkitekturer
Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	291,7 kbyte	588 kbyte	[filförteckning]
i386	302,4 kbyte	623 kbyte	[filförteckning]

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