[ Källkod: freebayes ]
Paket: freebayes (1.1.0-1)
Länkar för freebayes
Trisquelresurser:
Hämta källkodspaketet freebayes:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Brad Chapman
- Andreas Tille
Externa resurser:
- Hemsida [github.com]
Liknande paket:
Bayesian haplotype-based polymorphism discovery and genotyping
FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
Andra paket besläktade med freebayes
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
-
- dep: libdisorder0 (>= 0.0.2)
- library for entropy measurement of byte streams
-
- dep: libfml0
- library for assembling Illumina short reads in small regions
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libhts2 (>= 1.0)
- C library for high-throughput sequencing data formats
-
- dep: libjsoncpp1 (>= 1.7.4)
- library for reading and writing JSON for C++
-
- dep: libseqlib0
- C++ htslib/bwa-mem/fermi interface for interrogating sequence data
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- dep: libsmithwaterman0
- determine similar regions between two strings or genomic sequences (lib)
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- dep: libssw0
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: libtabixpp0
- C++ wrapper to tabix indexer
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- dep: libvcflib1
- C++ library for parsing and manipulating VCF files
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: parallel
- build and execute command lines from standard input in parallel
Hämta freebayes
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 935,1 kbyte | 2967 kbyte | [filförteckning] |