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[ Källkod: libssw  ]

Paket: ssw-align (1.1-1)

Smith-Waterman aligner based on libssw

This package provides a command-line aligner based on the libssw library, a fast SIMD accelerated implementation of the Smith-Waterman algorithm. The input files can be in FASTA or FASTQ format. Both target and query files can contain multiple sequences. Each sequence in the query file will be aligned with all sequences in the target file. Output is provided in SAM or BLAST-like text format.

Andra paket besläktade med ssw-align

  • beror
  • rekommenderar
  • föreslår
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    också ett virtuellt paket som tillhandahålls av libc6-udeb
  • dep: libssw0 (= 1.1-1)
    fast SIMD parallelized implementation of the Smith-Waterman algorithm
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Hämta ssw-align

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amd64 11,7 kbyte37 kbyte [filförteckning]