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[ Kaynak: spoa  ]

Paket: spoa (4.0.7+ds-2)

SIMD partial order alignment tool

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

spoa ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [armhf değil]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libspoa7.0.0 (>= 4.0.5+ds) [amd64]
    SIMD partial order alignment library
    dep: libspoa7.0.0 (>= 4.0.7+ds) [amd64 değil]
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

spoa indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 36,5 kB82 kB [dosya listesi]
arm64 35,8 kB74 kB [dosya listesi]
armhf 33,8 kB61 kB [dosya listesi]
ppc64el 37,9 kB98 kB [dosya listesi]