Paket: libseqlib1 (1.1.2+dfsg-6)
libseqlib1 için bağlantılar
Trisquel Kaynakları:
libseqlib Kaynak Paketini İndir:
- [libseqlib_1.1.2+dfsg-6.dsc]
- [libseqlib_1.1.2+dfsg.orig.tar.xz]
- [libseqlib_1.1.2+dfsg-6.debian.tar.xz]
Geliştirici:
Original Maintainers:
- Debian Med Packaging Team (Posta Arşivi)
- Andreas Tille
Dış Kaynaklar:
- Ana Sayfa [github.com]
Benzer paketler:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
libseqlib1 ile İlgili Diğer Paketler
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
- dep: libc6 (>= 2.4) [armhf]
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- dep: libfml0 (>= 0.1)
- library for assembling Illumina short reads in small regions
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libjsoncpp1 (>= 1.7.4)
- library for reading and writing JSON for C++
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- dep: libssw0 (>= 1.1)
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
libseqlib1 indir
Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
---|---|---|---|
amd64 | 118,9 kB | 404 kB | [dosya listesi] |
armhf | 103,1 kB | 278 kB | [dosya listesi] |