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Paket: khmer (2.1.2+dfsg-6build2)

in-memory DNA sequence kmer counting, filtering & graph traversal

khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.

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  • dep: cython3 (>= 0.26.1)
    C-Extensions for Python 3
  • dep: khmer-common
    common files for the khmer project tools
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
  • dep: libgcc-s1 (>= 3.4)
    GCC support library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (<< 3.9)
    dep: python3 (>= 3.8~)
  • dep: python3-bz2file
    Python3 library for reading and writing bzip2-compressed files
  • dep: python3-screed (>= 1.0)
    short nucleotide read sequence utils in Python 3
  • dep: zlib1g (>= 1:1.2.3.4)
    compression library - runtime

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amd64 6.565,8 kB29832 kB [dosya listesi]