Skip to content
Sections
>> Trisquel >> Paketler >> nabia >> science >> arden
etiona  ] [  nabia  ] [  aramo  ]
[ Kaynak: arden  ]

Paket: arden (1.0-5)

specificity control for read alignments using an artificial reference

ARDEN (Artificial Reference Driven Estimation of false positives in NGS data) is a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.

arden ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-htseq
    Python3 high-throughput genome sequencing read analysis utilities
  • dep: python3-matplotlib
    Python based plotting system in a style similar to Matlab (Python 3)
  • dep: python3-numpy
    Fast array facility to the Python 3 language
  • dep: python3-scipy
    scientific tools for Python 3

arden indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
all 87,1 kB1156 kB [dosya listesi]