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Paket: phybin (0.3-3build3)

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

phybin ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: libatomic1 (>= 4.8)
    support library providing __atomic built-in functions
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
  • dep: libffi7 (>= 3.3~20180313)
    Foreign Function Interface library runtime
  • dep: libgmp10
    Multiprecision arithmetic library

phybin indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 1.574,0 kB11805 kB [dosya listesi]
armhf 1.818,4 kB12380 kB [dosya listesi]