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Paket: scoary (1.6.16-2)

pangenome-wide association studies

Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the associations between all genes in the accessory genome and the traits. It reports a list of genes sorted by strength of association per trait.

scoary ile İlgili Diğer Paketler

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  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (>= 3.2)
  • dep: python3-pkg-resources
    Package Discovery and Resource Access using pkg_resources
  • dep: python3-scipy (>= 0.16)
    scientific tools for Python 3
  • sug: roary
    high speed stand alone pan genome pipeline

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