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[ Kaynak: spaln  ]

Paket: spaln (2.4.0+dfsg-2build1)

spaln için bağlantılar

spaln

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spaln Kaynak Paketini İndir:

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splicing-aware transcript-alignment to genomic DNA

Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.

spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.

spaln ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3
  • dep: spaln-data
    splicing-aware transcript-alignment to genomic DNA (data)

spaln indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 312,7 kB763 kB [dosya listesi]
armhf 279,2 kB529 kB [dosya listesi]