[ nabia ]
[ aramo ]
[ Kaynak: stringtie ]
Paket: stringtie (2.1.1+ds-2)
stringtie için bağlantılar
Trisquel Kaynakları:
stringtie Kaynak Paketini İndir:
Geliştirici:
Original Maintainers:
- Debian Med Packaging Team (Posta Arşivi)
- Steffen Moeller
Dış Kaynaklar:
- Ana Sayfa [ccb.jhu.edu]
Benzer paketler:
assemble short RNAseq reads to transcripts
The abundance of transcripts in a human tissue sample can be determined by RNA sequencing. The exact sequence sampled may be random, depending on the technology used. And it may be short, i.e. shorter than the transcript. At some point, many shorter reads need to be assembled to the model the complete transcripts.
StringTie knows how to assemble of RNA-Seq into potential transcripts without the need of a reference genome and provides a quantification also of the splice variants.
stringtie ile İlgili Diğer Paketler
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
- dep: libc6 (>= 2.7) [armhf]
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- dep: libgcc-s1 (>= 3.4) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 4.1.1)
- GNU Standard C++ Library v3
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- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime
stringtie indir
| Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
|---|---|---|---|
| amd64 | 396,2 kB | 1047 kB | [dosya listesi] |
| armhf | 344,8 kB | 674 kB | [dosya listesi] |