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Paket: tvc (5.0.3+git20151221.80e144e+dfsg-3)

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

tvc ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: libarmadillo9 (>= 1:9.800.4+dfsg)
    streamlined C++ linear algebra library
  • dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
    dynamic library for manipulating BAM (genome alignment) files
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
  • dep: libdisorder0 (>= 0.0.2)
    library for entropy measurement of byte streams
  • dep: libgcc-s1 (>= 3.0) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libjsoncpp1 (>= 1.7.4)
    library for reading and writing JSON for C++
  • dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
    determine similar regions between two strings or genomic sequences (lib)
  • dep: libstdc++6 (>= 9)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

tvc indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 1.062,0 kB3452 kB [dosya listesi]
armhf 963,3 kB2657 kB [dosya listesi]