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[ Source: minimap2  ]

Пакунок: python3-mappy (2.26+dfsg-1build1)

Python3 interface minimap2

Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database. Typical use cases include: (1) mapping PacBio or Oxford Nanopore genomic reads to the human genome; (2) finding overlaps between long reads with error rate up to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA or Direct RNA reads against a reference genome; (4) aligning Illumina single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full- genome alignment between two closely related species with divergence below ~15%.

This package contains the Python3 interface for using minimap2.

Інші пакунки пов'язані з python3-mappy

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (<< 3.13)
    dep: python3 (>= 3.12~)
  • dep: zlib1g (>= 1:1.2.3.3)
    compression library - runtime

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amd64 145.9 kB350 kB [список файлів]