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Пакунок: snakemake (4.3.1-1)

pythonic workflow management system

Build systems like GNU Make are frequently used to create complicated workflows, e.g. in bioinformatics. This project aims to reduce the complexity of creating workflows by providing a clean and modern domain specific language (DSL) in Python style, together with a fast and comfortable execution environment.

Інші пакунки пов'язані з snakemake

  • depends
  • recommends
  • suggests
  • dep: ca-certificates
    Common CA certificates
  • dep: libjs-d3
    JavaScript visualization library for HTML and SVG
  • dep: libjs-mathjax
    JavaScript display engine for LaTeX and MathML
  • dep: libjs-sphinxdoc (>= 1.0)
    JavaScript support for Sphinx documentation
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-appdirs
    determining appropriate platform-specific directories (Python 3)
  • dep: python3-configargparse
    replacement for argparse with config files and environment variables (Python 3)
  • dep: python3-docutils
    text processing system for reStructuredText (implemented in Python 3)
  • dep: python3-psutil
    module providing convenience functions for managing processes (Python3)
  • dep: python3-pytools
    big bag of things supplementing Python 3 standard library
  • dep: python3-ratelimiter
    simple Python library for limiting the rate of operations
  • dep: python3-requests
    elegant and simple HTTP library for Python3, built for human beings
  • dep: python3-rpy2
    Python3 interface to the GNU R language and environment (version 2)
  • dep: python3-setuptools
    Python3 Distutils Enhancements
  • dep: python3-wrapt
    decorators, wrappers and monkey patching. - Python 3.x
  • dep: python3-yaml
    YAML parser and emitter for Python3
  • dep: sphinx-rtd-theme-common
    sphinx theme from readthedocs.org (common files)
  • rec: python3-boto
    Python interface to Amazon's Web Services - Python 3.x

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