[ Source: last-align ]
Пакунок: last-align (1060-1)
Links for last-align
Trisquel Resources:
Download Source Package last-align:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Charles Plessy
- Andreas Tille
External Resources:
- Homepage [last.cbrc.jp]
Similar packages:
genome-scale comparison of biological sequences
LAST is software for comparing and aligning sequences, typically DNA or protein sequences. LAST is similar to BLAST, but it copes better with very large amounts of sequence data. Here are two things LAST is good at:
* Comparing large (e.g. mammalian) genomes. * Mapping lots of sequence tags onto a genome.
The main technical innovation is that LAST finds initial matches based on their multiplicity, instead of using a fixed size (e.g. BLAST uses 10-mers). This allows one to map tags to genomes without repeat-masking, without becoming overwhelmed by repetitive hits. To find these variable-sized matches, it uses a suffix array (inspired by Vmatch). To achieve high sensitivity, it uses a discontiguous suffix array, analogous to spaced seeds.
Інші пакунки пов'язані з last-align
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- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libstdc++6 (>= 6)
- GNU Standard C++ Library v3
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- dep: parallel
- build and execute command lines from standard input in parallel
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: python3
- interactive high-level object-oriented language (default python3 version)
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- rec: python3-pil
- Python Imaging Library (Python3)
Завантажити last-align
| Архітектура | Розмір пакунка | Розмір після встановлення | Файли |
|---|---|---|---|
| amd64 | 1,739.5 kB | 20816 kB | [список файлів] |