[ ecne ]
[ xolotl ]
[ Source: snpsift ]
Package: snpsift (5.2.e+dfsg-2build1)
Links for snpsift
Trisquel Resources:
Download Source Package snpsift:
- [snpsift_5.2.e+dfsg.orig.tar.xz]
- [snpsift_5.2.e+dfsg-2build1.debian.tar.xz]
- [snpsift_5.2.e+dfsg-2build1.dsc]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Pierre Gruet
External Resources:
- Homepage [pcingola.github.io]
Similar packages:
tool to annotate and manipulate genome variants - tool
SnpSift is a toolbox that allows one to filter and manipulate annotated files. Once the genomic variants have been annotated, one needs to filter them out in order to find the "interesting / relevant variants". Given the large data files, this is not a trivial task (e.g. one cannot load all the variants into XLS spreadsheet). SnpSift helps to perform this VCF file manipulation and filtering required at this stage in data processing pipelines.
This package contains the command line tool.
Other Packages Related to snpsift
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: libsnpsift-java (= 5.2.e+dfsg-2build1)
- tool to annotate and manipulate genome variants - lib
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- sug: snpeff
- genetic variant annotation and effect prediction toolbox - tool
Download snpsift
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 4.0 kB | 15 kB | [list of files] |