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[ 源代码: gsort  ]

软件包: gsort (0.1.4-3)

sort genomic data

gsort is a tool to sort genomic files according to a genomefile. For example, to sort VCF to have order: X, Y, 2, 1, 3, ... and the header needs to be kept at the top.

As a more likely example, if a file nneds to be sorted to match GATK order (1 ... X, Y, MT) which is not possible with any other sorting tool. With gsort one can simply place MT as the last chrom in the ".genome" file.

It will also be useful for getting files ready for use in bedtools.

其他与 gsort 有关的软件包

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  • dep: libc6 (>= 2.32)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb

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硬件架构 软件包大小 安装后大小 文件
amd64 1,704.5 kB5385 kB [文件列表]