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[ 源代码: r-cran-gprofiler2  ]

软件包: r-cran-gprofiler2 (0.2.1+dfsg-1)

Interface to the 'g:Profiler' Toolset

A toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via 'g:Profiler' (<https://biit.cs.ut.ee/gprofiler>). The main tools are: (1) 'g:GOSt' - functional enrichment analysis and visualization of

    gene lists;
(2) 'g:Convert' - gene/protein/transcript identifier conversion across
    various namespaces;
(3) 'g:Orth' - orthology search across species; (4) 'g:SNPense' - mapping SNP rs identifiers to chromosome positions,
    genes and variant effects This package is an R interface
    corresponding to the 2019 update of 'g:Profiler' and provides access
    to 'g:Profiler' for versions 'e94_eg41_p11' and higher. See the
    package 'gProfileR' for accessing older versions from the
    'g:Profiler' toolset.

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  • sug: r-cran-knitr
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-rmarkdown
    convert R markdown documents into a variety of formats

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