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[ 源代码: smrtanalysis  ]

软件包: smrtanalysis (0~20210112)

software suite for single molecule, real-time sequencing

SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.

This is a metapackage that depends on the components of SMRT Analysis.

其他与 smrtanalysis 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: blasr
    mapping single-molecule sequencing reads
  • dep: pbbamtools
    processing Pacific Biosciences binary alignment/map files
  • dep: pbdagcon
    sequence consensus using directed acyclic graphs
  • sug: falcon
    软件包暂时不可用
  • sug: kineticstools
    detection of DNA modifications
  • sug: pbalign
    软件包暂时不可用
  • sug: pbbarcode
    软件包暂时不可用
  • sug: pbgenomicconsensus
    软件包暂时不可用
  • sug: pbh5tools
    软件包暂时不可用

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