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[ 源代码: tvc  ]

软件包: tvc (5.0.3+git20151221.80e144e+dfsg-4build1)

genetic variant caller for Ion Torrent sequencing platforms

Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.

其他与 tvc 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libarmadillo10 (>= 1:10.7.4+dfsg)
    streamlined C++ linear algebra library
  • dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
    dynamic library for manipulating BAM (genome alignment) files
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libdisorder0 (>= 0.0.2)
    library for entropy measurement of byte streams
  • dep: libgcc-s1 (>= 4.5)
    GCC support library
  • dep: libjsoncpp25 (>= 1.9.5)
    library for reading and writing JSON for C++
  • dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
    determine similar regions between two strings or genomic sequences (lib)
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

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硬件架构 软件包大小 安装后大小 文件
arm64 1,042.3 kB2844 kB [文件列表]