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[ 源代码: libmems  ]

软件包: libmems1 (1.6.0+4725-9build1)

library to support DNA string matching and comparative genomics

libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.

This package contains the dynamic library.

其他与 libmems1 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libboost-filesystem1.74.0 (>= 1.74.0)
    filesystem operations (portable paths, iteration over directories, etc) in C++
  • dep: libboost-iostreams1.74.0 (>= 1.74.0)
    Boost.Iostreams Library
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [arm64, ppc64el]
    GCC support library
    dep: libgcc-s1 (>= 3.4) [amd64]
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgenome0 (>= 1.3.11+svn20110227.4616)
    toolkit for developing bioinformatic related software
  • dep: libmuscle1 (>= 3.7+4565)
    multiple alignment library for protein sequences
  • dep: libstdc++6 (>= 5.2) [armhf]
    GNU Standard C++ Library v3
    dep: libstdc++6 (>= 9) [除 armhf]

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下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 655.0 kB2021 kB [文件列表]
arm64 611.0 kB1787 kB [文件列表]
armhf 545.2 kB1246 kB [文件列表]
ppc64el 788.9 kB2328 kB [文件列表]