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[ 源代码: bamclipper  ]

软件包: bamclipper (1.0.0-2)

Remove gene-specific primer sequences from SAM/BAM alignments

Remove gene-specific primer sequences from SAM/BAM alignments of PCR amplicons by soft-clipping.

bamclipper.sh soft-clips gene-specific primers from BAM alignment file based on genomic coordinates of primer pairs in BEDPE format.

其他与 bamclipper 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: parallel
    build and execute command lines from standard input in parallel
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats

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