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[ 源代码: r-bioc-genomeinfodb  ]

软件包: r-bioc-genomeinfodb (1.30.1-1)

BioConductor utilities for manipulating chromosome identifiers

This package contains BioConductor utilities for manipulating chromosome and other 'seqname' identifiers.

The Seqnames package contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., "chr1" versus "1"), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.

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    standard styles for vignettes and other Bioconductor documents
  • sug: r-bioc-bsgenome
    BioConductor infrastructure for Biostrings-based genome data packages
  • sug: r-bioc-genomicalignments
    BioConductor representation and manipulation of short genomic alignments
  • sug: r-bioc-genomicfeatures
    GNU R tools for making and manipulating transcript centric annotations
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    BioConductor representation and manipulation of genomic intervals
  • sug: r-bioc-rsamtools
    GNU R binary alignment (BAM), variant call (BCF), or tabix file import
  • sug: r-cran-knitr
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  • sug: r-cran-runit
    GNU R package providing unit testing framework

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