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[ 源代码: bowtie2  ]

软件包: bowtie2 (2.3.4.1-1)

bowtie2 的相关链接

bowtie2

Trisquel 的资源:

下载源码包 bowtie2:

维护者:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Alexandre Mestiashvili
  • Andreas Tille

外部的资源:

  • 主页 [bowtie-bio.sourceforge.net]

相似软件包:

ultrafast memory-efficient short read aligner

is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.

Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes

其他与 bowtie2 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: libtbb2
    parallelism library for C++ - runtime files
  • dep: python
    interactive high-level object-oriented language (default version)
  • dep: zlib1g (>= 1:1.2.6)
    compression library - runtime

下载 bowtie2

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 1,146.9 kB4980 kB [文件列表]