[ 源代码: mira ]
软件包: mira-assembler (4.9.6-3build2)
mira-assembler 的相关链接
Trisquel 的资源:
下载源码包 mira:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Charles Plessy
- Steffen Moeller
- Tim Booth
- Andreas Tille
- Thorsten Alteholz
- Michael R. Crusoe
外部的资源:
- 主页 [chevreux.org]
相似软件包:
Whole Genome Shotgun and EST Sequence Assembler
The mira genome fragment assembler is a specialised assembler for sequencing projects classified as 'hard' due to high number of similar repeats. For expressed sequence tags (ESTs) transcripts, miraEST is specialised on reconstructing pristine mRNA transcripts while detecting and classifying single nucleotide polymorphisms (SNP) occurring in different variations thereof.
The assembler is routinely used for such various tasks as mutation detection in different cell types, similarity analysis of transcripts between organisms, and pristine assembly of sequences from various sources for oligo design in clinical microarray experiments.
The package provides the following executables: Binaries provided:
* mira: for assembly of genome sequences * miramem: estimating memory needed to assemble projects. * mirabait: a "grep" like tool to select reads with kmers up to 256 bases. * miraconvert: is a tool to convert, extract and sometimes recalculate all kinds of data related to sequence assembly files.
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- dep: libstdc++6 (>= 5.2)
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- rec: mira-rfam-12s-rrna
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- sug: mira-doc
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