[ 源代码: stacks ]
软件包: stacks (2.0Beta8c+dfsg-1)
stacks 的相关链接
Trisquel 的资源:
下载源码包 stacks:
- [stacks_2.0Beta8c+dfsg-1.dsc]
- [stacks_2.0Beta8c+dfsg.orig.tar.xz]
- [stacks_2.0Beta8c+dfsg-1.debian.tar.xz]
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Tim Booth
- Andreas Tille
外部的资源:
- 主页 [creskolab.uoregon.edu]
相似软件包:
pipeline for building loci from short-read DNA sequences
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>
其他与 stacks 有关的软件包
|
|
|
-
- dep: libc6 (>= 2.17)
- GNU C Library: Shared libraries
同时作为一个虚包由这些包填实: libc6-udeb
-
- dep: libdbi-perl
- Perl Database Interface (DBI)
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
-
- dep: libhts2 (>= 1.0)
- C library for high-throughput sequencing data formats
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: python
- interactive high-level object-oriented language (default version)
-
- dep: samtools
- processing sequence alignments in SAM and BAM formats
-
- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
-
- rec: libspreadsheet-writeexcel-perl
- module to create Excel spreadsheets