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[ 源代码: phybin  ]

软件包: phybin (0.3-1)

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

其他与 phybin 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libffi6 (>= 3.0.4)
    Foreign Function Interface library runtime
  • dep: libgmp10
    Multiprecision arithmetic library

下载 phybin

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 1,608.1 kB12671 kB [文件列表]
i386 1,626.1 kB9926 kB [文件列表]