[ etiona ]
[ 源代码: python-pyfaidx ]
软件包: python-pyfaidx (0.4.8.1-1)
python-pyfaidx 的相关链接
Trisquel 的资源:
下载源码包 python-pyfaidx:
- [python-pyfaidx_0.4.8.1-1.dsc]
- [python-pyfaidx_0.4.8.1.orig.tar.gz]
- [python-pyfaidx_0.4.8.1-1.debian.tar.xz]
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
外部的资源:
- 主页 [github.com]
相似软件包:
efficient random access to fasta subsequences for Python
Samtools provides a function "faidx" (FAsta InDeX), which creates a small flat index file ".fai" allowing for fast random access to any subsequence in the indexed FASTA file, while loading a minimal amount of the file in to memory. This Python module implements pure Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index. The pyfaidx module is API compatible with the pygr seqdb module. A command-line script "faidx" is installed alongside the pyfaidx module, and facilitates complex manipulation of FASTA files without any programming knowledge.
This package provides the Python 2 modules to access fasta files.
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