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[ 源代码: samtools  ]

软件包: samtools (1.7-1)

processing sequence alignments in SAM and BAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.

其他与 samtools 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
    dep: libc6 (>= 2.7) [i386]
  • dep: libhts2 (>= 1.7-1)
    C library for high-throughput sequencing data formats
  • dep: libncurses5 (>= 6)
    shared libraries for terminal handling
  • dep: libtinfo5 (>= 6)
    shared low-level terminfo library for terminal handling
  • dep: zlib1g (>= 1:1.1.4) [amd64]
    compression library - runtime
    dep: zlib1g (>= 1:1.2.3.3) [i386]
  • rec: cwltool
    Common Workflow Language reference implementation
  • rec: python
    interactive high-level object-oriented language (default version)

下载 samtools

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 281.7 kB810 kB [文件列表]
i386 299.4 kB856 kB [文件列表]