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[ 源代码: hinge  ]

软件包: hinge (0.5.0-3)

hinge 的相关链接

hinge

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long read genome assembler based on hinging

HINGE is a genome assembler that seeks to achieve optimal repeat resolution by distinguishing repeats that can be resolved given the data from those that cannot. This is accomplished by adding “hinges” to reads for constructing an overlap graph where only unresolvable repeats are merged. As a result, HINGE combines the error resilience of overlap-based assemblers with repeat-resolution capabilities of de Bruijn graph assemblers.

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  • dep: daligner
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  • dep: libgcc1 (>= 1:3.0)
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  • dep: libgomp1 (>= 4.2.1)
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  • dep: libstdc++6 (>= 5.2)
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  • dep: python
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  • dep: python-configparser
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  • dep: python-pbcore
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  • dep: zlib1g (>= 1:1.1.4)
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硬件架构 软件包大小 安装后大小 文件
amd64 382.0 kB2450 kB [文件列表]