[ 源代码: miniasm ]
软件包: miniasm (0.2+dfsg-2)
miniasm 的相关链接
Trisquel 的资源:
下载源码包 miniasm:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Sascha Steinbiss
外部的资源:
- 主页 [github.com]
相似软件包:
ultrafast de novo assembler for long noisy DNA sequencing reads
Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
其他与 miniasm 有关的软件包
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
同时作为一个虚包由这些包填实: libc6-udeb
- dep: libc6 (>= 2.4) [i386]
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: minimap
- tool for approximate mapping of long biosequences such as DNA reads