[ 源代码: mummer ]
软件包: mummer (3.23+dfsg-3)
mummer 的相关链接
Trisquel 的资源:
下载源码包 mummer:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Steffen Moeller
- Andreas Tille
- Charles Plessy
外部的资源:
- 主页 [mummer.sourceforge.net]
相似软件包:
Efficient sequence alignment of full genomes
MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.
其他与 mummer 有关的软件包
|
|
|
-
- dep: gawk
- GNU awk, a pattern scanning and processing language
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
同时作为一个虚包由这些包填实: libc6-udeb
- dep: libc6 (>= 2.7) [i386]
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language