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[ 源代码: quorum  ]

软件包: quorum (1.1.1-1)

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quorum

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QUality Optimized Reads of genomic sequences

QuorUM enables to obtain trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. QuorUM provides best performance compared to other published error correctors in several metrics. QuorUM is efficiently implemented making use of current multi- core computing architectures and it is suitable for large data sets (1 billion bases checked and corrected per day per core). The third-party assembler (SOAPdenovo) benefits significantly from using QuorUM error- corrected reads. QuorUM error corrected reads result in a factor of 1.1 to 4 improvement in N50 contig size compared to using the original reads with SOAPdenovo for the data sets investigated.

其他与 quorum 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libjellyfish-2.0-2
    count k-mers in DNA sequences (dynamic library of jellyfish)
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3

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硬件架构 软件包大小 安装后大小 文件
amd64 119.9 kB396 kB [文件列表]