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[ 源代码: tree-puzzle  ]

软件包: tree-ppuzzle (5.2-10)

tree-ppuzzle 的相关链接

tree-ppuzzle

Trisquel 的资源:

下载源码包 tree-puzzle:

维护者:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Charles Plessy

外部的资源:

相似软件包:

Parallelized reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

This is the parallelized version of tree-puzzle.

其他与 tree-ppuzzle 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.7)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libopenmpi2
    high performance message passing library -- shared library
  • dep: libsprng2
    SPRNG Scalable Parallel RNG library -- library package
  • dep: openmpi-bin
    high performance message passing library -- binaries
  • rec: tree-puzzle-doc
    Reconstruction of phylogenetic trees by maximum likelihood (doc)
  • sug: phylip
    package of programs for inferring phylogenies
  • sug: treetool
    软件包暂时不可用

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下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 142.8 kB348 kB [文件列表]
i386 143.7 kB372 kB [文件列表]