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[ 源代码: velvet  ]

软件包: velvet-long (1.2.10+dfsg1-3build1)

Nucleic acid sequence assembler for very short reads, long version

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

This package installs special long-mode versions of Velvet, as recommended in the Velvet tutorials.

其他与 velvet-long 有关的软件包

  • 依赖
  • 推荐
  • 建议
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
    dep: libc6 (>= 2.7) [i386]
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: velvet
    Nucleic acid sequence assembler for very short reads
  • dep: zlib1g (>= 1:1.2.0.2)
    compression library - runtime

下载 velvet-long

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 190.3 kB1133 kB [文件列表]
i386 221.4 kB1431 kB [文件列表]