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[ 源代码: porechop  ]

软件包: porechop (0.2.4+dfsg-1build2)

adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

其他与 porechop 有关的软件包

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  • 建议
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    同时作为一个虚包由这些包填实: libc6-udeb
  • dep: libgcc-s1 (>= 3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (>= 3~)

下载 porechop

下载可用于所有硬件架构的
硬件架构 软件包大小 安装后大小 文件
amd64 55.4 kB245 kB [文件列表]