软件包: barrnap (0.9+dfsg-1)
barrnap 的相关链接
Trisquel 的资源:
下载源码包 barrnap:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Sascha Steinbiss
外部的资源:
- 主页 [www.vicbioinformatics.com]
相似软件包:
rapid ribosomal RNA prediction
Barrnap (BAsic Rapid Ribosomal RNA Predictor) predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S).
It takes FASTA DNA sequence as input, and writes GFF3 as output. It uses the NHMMER tool that comes with HMMER 3.1 for HMM searching in RNA:DNA style. Multithreading is supported and one can expect roughly linear speed-ups with more CPUs.
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