软件包: chromhmm (1.20+dfsg-1)
chromhmm 的相关链接
Trisquel 的资源:
下载源码包 chromhmm:
维护者:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Dylan Aïssi
外部的资源:
- 主页 [compbio.mit.edu]
相似软件包:
Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of each chromatin mark. The resulting model can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets ChromHMM facilitates the biological characterization of each state. ChromHMM also produces files with genome-wide maps of chromatin state annotations that can be directly visualized in a genome browser.
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