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[ 原始碼: metastudent  ]

套件: metastudent (2.0.1-9)

predictor of Gene Ontology terms from protein sequence

Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).

All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function (MFO), the Biological Process (BPO) and the Cellular Component Ontology (CCO) and are associated with a reliability score.

其他與 metastudent 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: default-jre
    Standard Java or Java compatible Runtime
  • dep: libfile-chdir-perl
    more sensible way to change directories
  • dep: libgo-perl
    perl modules for GO and other OBO ontologies
  • dep: libgraphviz-perl
    Perl interface to the GraphViz graphing tool
  • dep: libipc-run-perl
    Perl module for running processes
  • dep: metastudent-data
    predictor of Gene Ontology terms from protein sequence - data files
  • dep: ncbi-blast+-legacy
    NCBI Blast legacy call script
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python3
    interactive high-level object-oriented language (default python3 version)

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