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[ 原始碼: flexbar  ]

套件: flexbar (1:3.5.0-4ubuntu1)

flexible barcode and adapter removal for sequencing platforms

Flexbar preprocesses high-throughput sequencing data efficiently. It demultiplexes barcoded runs and removes adapter sequences. Moreover, trimming and filtering features are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform.

Parameter names changed in Flexbar. Please review scripts. The recent months, default settings were optimised, several bugs were fixed and various improvements were made, e.g. revamped command-line interface, new trimming modes as well as lower time and memory requirements.

其他與 flexbar 有關的套件

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  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1) [除 armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 12)
    GNU Standard C++ Library v3
  • dep: libtbb2 (>= 2017~U7) [amd64]
    parallelism library for C++ - runtime files
    dep: libtbb2 (>= 2020.3) [除 amd64]
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

下載 flexbar

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 337.2 kB954 kB [文件列表]
arm64 306.8 kB846 kB [文件列表]
armhf 336.9 kB805 kB [文件列表]
ppc64el 356.1 kB1150 kB [文件列表]