[ aramo ]
[ 原始碼： parallel-fastq-dump ]
套件： parallel-fastq-dump (0.6.7-2)
parallel-fastq-dump 的相關超連結
Trisquel 的資源：
下載原始碼套件 parallel-fastq-dump：
- [parallel-fastq-dump_0.6.7-2.dsc]
- [parallel-fastq-dump_0.6.7.orig.tar.gz]
- [parallel-fastq-dump_0.6.7-2.debian.tar.xz]
維護者：
Original Maintainers:
- Debian Med Packaging Team (郵件存檔)
- Andreas Tille
外部的資源：
- 主頁 [github.com]
相似套件：
parallel fastq-dump wrapper
NCBI fastq-dump can be very slow sometimes, even if you have the resources (network, IO, CPU) to go faster, even if you already downloaded the sra file. This tool speeds up the process by dividing the work into multiple threads.
This is possible because fastq-dump have options (-N and -X) to query specific ranges of the sra file, this tool works by dividing the work into the requested number of threads, running multiple fastq-dump in parallel and concatenating the results back together, as if you had just executed a plain fastq-dump call.
其他與 parallel-fastq-dump 有關的套件
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: sra-toolkit
- utilities for the NCBI Sequence Read Archive