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[ 原始碼: samtools  ]

套件: samtools (1.13-4)

samtools 的相關超連結

samtools

Trisquel 的資源:

下載原始碼套件 samtools

維護者:

Original Maintainers:

  • Debian Med Packaging Team (郵件存檔)
  • Charles Plessy
  • Andreas Tille
  • Étienne Mollier

外部的資源:

相似套件:

processing sequence alignments in SAM, BAM and CRAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.

其他與 samtools 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb
  • dep: libhts3 (>= 1.13)
    C library for high-throughput sequencing data formats
  • dep: libncurses6 (>= 6)
    shared libraries for terminal handling
  • dep: libtinfo6 (>= 6)
    shared low-level terminfo library for terminal handling
  • dep: zlib1g (>= 1:1.1.4) [除 armhf]
    compression library - runtime
    dep: zlib1g (>= 1:1.2.3.3) [armhf]
  • sug: cwltool
    Common Workflow Language reference implementation

下載 samtools

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 507.6 kB1155 kB [文件列表]
arm64 506.2 kB1095 kB [文件列表]
armhf 525.8 kB1016 kB [文件列表]
ppc64el 572.7 kB1687 kB [文件列表]