Skip to content
Sections
>> Trisquel >> 套件 >> aramo >> science >> gsort
aramo  ]
[ 原始碼: gsort  ]

套件: gsort (0.1.4-3)

sort genomic data

gsort is a tool to sort genomic files according to a genomefile. For example, to sort VCF to have order: X, Y, 2, 1, 3, ... and the header needs to be kept at the top.

As a more likely example, if a file nneds to be sorted to match GATK order (1 ... X, Y, MT) which is not possible with any other sorting tool. With gsort one can simply place MT as the last chrom in the ".genome" file.

It will also be useful for getting files ready for use in bedtools.

其他與 gsort 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: libc6 (>= 2.32)
    GNU C Library: Shared libraries
    同時作為一個虛擬套件由這些套件提供: libc6-udeb

下載 gsort

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 1,704.5 kB5385 kB [文件列表]
arm64 1,452.8 kB4964 kB [文件列表]
armhf 1,479.6 kB4611 kB [文件列表]
ppc64el 1,427.6 kB5028 kB [文件列表]