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[ 原始碼: nanolyse  ]

套件: nanolyse (1.2.0-3)

nanolyse 的相關超連結

nanolyse

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下載原始碼套件 nanolyse

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remove lambda phage reads from a fastq file

NanoLyse is a tool for rapid removal of contaminant DNA, using the Minimap2 aligner through the mappy Python binding. A typical application would be the removal of the lambda phage control DNA fragment supplied by ONT, for which the reference sequence is included in the package. However, this approach may lead to unwanted loss of reads from regions highly homologous to the lambda phage genome.

其他與 nanolyse 有關的套件

  • 依賴
  • 推薦
  • 建議
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-biopython
    Python3 library for bioinformatics
  • dep: python3-mappy
    Python3 interface minimap2

下載 nanolyse

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 25.2 kB66 kB [文件列表]
arm64 25.2 kB66 kB [文件列表]
armhf 25.2 kB66 kB [文件列表]
ppc64el 25.2 kB66 kB [文件列表]